minus_35_signal [SO_0000176]

A conserved hexamer about 35-bp upstream of the start point of bacterial transcription units; consensus=TTGACa or TGTTGACA. This region is associated with sigma factor 70.

minus_35_signal

ID: SO_0000176

Class

A conserved hexamer about 35-bp upstream of the start point of bacterial transcription units; consensus=TTGACa or TGTTGACA. This region is associated with sigma factor 70.

Changed from is_a SO:0000713 DNA_motif to is_a SO:0002312 core_prokaryotic_promoter_element in response to GREEKC Initiative Dave Sant Aug 2020. Changed from is_a SO:0002312 core_prokaryotic_promoter_element back to is_a SO:0000713 DNA_motif to be consistent with minus_12_signal and minus_24_signal on 12 July 2021.

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Classification

DNA_motif

Relationships

is part of: bacterial_RNApol_promoter_sigma_70, bacterial_RNApol_promoter_sigma_ecf_element

Alternative Names

Synonym	Scope	Reference
INSDC_feature:regulatory	broad synonym
INSDC_qualifier:minus_35_signal	exact synonym
minus 35 signal	exact synonym
-35 signal	exact synonym

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an> "type": "part_of" }, "object": { "symbol": "", "iri": "http://purl.obolibrary.org/obo/SO_0001913", "types": [ "Entity", "Class" ], "short_form": "SO_0001913", "label": "bacterial_RNApol_promoter_sigma_ecf_element" } }, { "relation": { "iri": "http://purl.obolibrary.org/obo/BFO_0000050", "label": "is part of", "type": "part_of" }, "object": { "symbol": "", "iri": "http://purl.obolibrary.org/obo/SO_0001671", "types": [ "Entity", "Class" ], "short_form": "SO_0001671", "label": "bacterial_RNApol_promoter_sigma_70" } } ], "xrefs": [], "anatomy_channel_image": [], "pub_syn": [ { "synonym": { "scope": "has_exact_synonym", "label": "INSDC_qualifier:minus_35_signal", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_exact_synonym", "label": "-35 signal", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_exact_synonym", "label": "minus 35 signal", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_broad_synonym", "label": "INSDC_feature:regulatory", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } } ], "def_pubs": [ { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } ] }

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